Changes in version 1.0.3 - Add tag ImmunoOncology to BiocViews Changes in version 1.0.2 - Fix comparison against CMap perturbations using gene set enrichment analysis (the resulting score was the additive inverse of the real scores) Changes in version 1.0.1 - Update title, author names, version and README - Remove biomaRt dependency - By default, getL1000conditions now shows CMap perturbation types except for controls - Compare against CMap perturbations (compareAgainstL1000 function): - Remove "_t" from resulting column names (as the t-statistic may or may not be used) - Select p-value adjustment method when performing correlation analyses (Benjamini-Hochberg is set by default) - Documentation: - Fix obsolete function calls in function documentation - Hide non-exported functions from reference PDF manual