\name{snp.clust.plot} \alias{snp.clust.plot} %- Also NEED an '\alias' for EACH other topic documented here. \title{ function to do colorized cluster plots } \description{ colorised cluster plots, typically for the purpose of verifying the validity of clustering } \usage{ snp.clust.plot(cluster, gtype, title = "test") } %- maybe also 'usage' for other objects documented here. \arguments{ \item{cluster}{one member from output of \code{read.wtccc.signals} } \item{gtype}{one column of a \code{snp.matrix-class} object. } \item{title}{title of the plot } } \details{ See vignette for usage. } \value{None } \references{ %% ~put references to the literature/web site here ~ } \author{ %% ~~who you are~~ } \note{ %% ~~further notes~~ } %% ~Make other sections like Warning with \section{Warning }{....} ~ \seealso{ \code{\link{read.wtccc.signals}},\code{\link{snp.matrix-class}} } \examples{ load(system.file("data/Genotypes.GenTrain1.Rda",package="snpMatrix")) ab.signals <- read.wtccc.signals(system.file("data/example-new.txt", package="snpMatrix"),"rs1") snp.clust.plot(ab.signals[['rs1']], GenTrain1[,'rs1'], title='test') } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory. %\keyword{ ~kwd1 } %\keyword{ ~kwd2 }% __ONLY ONE__ keyword per line