\name{aqm.pmmm} \alias{aqm.pmmm} \title{ Performs perfect match versus mismatch density plots. } \description{ \code{aqm.pmmm} performs PM MM density curves on objects of class \code{\link[affy:AffyBatch-class]{AffyBatch}} and formats the output for \code{aqm.plot} usage. } \usage{ aqm.pmmm(expressionset, ...) } \arguments{ \item{expressionset}{ is an object of class \code{\link[affy:AffyBatch-class]{AffyBatch}}} \item{...}{ Any arguments to \code{density} } } \value{ An object of class \code{\link{aqmobj.pmmm}}. } \author{ Audrey Kauffmann } \seealso{ \code{\link{aqmobj.pmmm}} } \examples{ library(ALLMLL) data(MLL.A) pm = aqm.pmmm(MLL.A) class(pm) aqm.plot(pm) }