\name{getArrayLayoutLimma} \alias{getArrayLayoutLimma} \title{Get layout for limma} \description{ This function gets the genes dataframe. } \usage{ getArrayLayoutLimma( mageOM, arrayID = "none", DED = "none", db = "none") } \arguments{ \item{mageOM}{Reference to MAGE Object Model} \item{arrayID}{Array identifier} \item{DED}{The DesignElement Dimension} \item{db}{database identifier to be retrieved} } \references{Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr and Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. } \author{Steffen Durinck, \url{http://www.esat.kuleuven.ac.be/~sdurinck}\cr Joke Allemeersch, \url{http://www.esat.kuleuven.ac.be/~jallemee}.} \seealso{\code{\link{importMAGEOM}}} \examples{ if(interactive()){ data<-system.file("MAGEMLdata", package="RMAGEML") #To obtain a marrayInfo object containing the database identifiers of the features present on the array.# mageom<-importMAGEOM(directory=data) getArrayLayoutLimma(mageom, arrayID="A-MEXP-14",DED="DED:707") } } \keyword{methods}