\name{norm} \alias{norm} \title{Normalization function } \description{ This function normalizes a matrix by subtracting the column (sample) mean from each element and adding the grand mean. } \usage{ norm(mat1) } \arguments{ \item{mat1}{ A \code{matrix} to be normalized } } \value{ \item{matnorm}{Normalized \code{matrix}} } \references{ \url{http://dmrocke.ucdavis.edu} } \author{ David Rocke and Geun-Cheol Lee } \seealso{ \code{\link{lnorm}}} \examples{ library(Biobase) library(LMGene) #data data(sample.mat) data(vlist) raw.eS <- neweS(sample.mat, vlist) # glog transform data trans.eS <- transeS(raw.eS, lambda = 727, alpha = 56) # normalize normed.exprs <- norm(exprs(trans.eS)) }