\name{@ANNOBJPREFIX@ORF} \alias{@ANNOBJPREFIX@ORF} \alias{@ANNOBJPREFIX@ORF2EG} \title{Map ORF acessions with Entrez Gene identifiers} \description{ @ANNOBJPREFIX@ORF is an R object that contains mappings between Entrez Gene identifiers and ORF accessions. } \details{ This object is a simple mapping of Entrez Gene identifiers \url{http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene} to ORF accessions. Mappings were based on data provided by: @ORFSOURCE@ } \examples{ x <- @ANNOBJPREFIX@ORF # Get the entrez gene identifiers that are mapped to a ORF ID mapped_genes <- mappedkeys(x) # Convert to a list xx <- as.list(x[mapped_genes]) if(length(xx) > 0) { # Get the Orf IDs for the first five genes xx[1:5] # Get the first one xx[[1]] } #For the reverse map ORF2EG: # Convert to a list xx <- as.list(@ANNOBJPREFIX@ORF2EG) if(length(xx) > 0){ # Gets the entrez gene identifiers for the first five ORF IDs xx[1:5] # Get the first one xx[[1]] } } \keyword{datasets}