Package |
Maintainer |
Title |
aCGH
|
Peter Dimitrov |
Classes and functions for Array Comparative Genomic
Hybridization data. |
Biostrings
|
H. Pages |
String objects representing biological sequences, and matching
algorithms |
BSgenome
|
H. Pages |
Infrastructure for Biostrings-based genome data packages |
CSAR
|
Jose M Muino |
Statistical tools for the analysis of ChIP-seq data |
fbat
|
The R Genetics Project
|
Family Based Association Tests for genetic data. |
GeneR
|
Y. d'Aubenton-Carafa |
R for genes and sequences analysis |
GeneRfold
|
Antoine Lucas |
R for genes and sequences, using viennaRNA package (fold) |
GeneticsBase
|
The R Genetics Project
|
Classes and functions for handling genetic data |
GeneticsDesign
|
The R Genetics Project
|
Functions for designing genetics studies |
GeneticsPed
|
David Henderson |
Pedigree and genetic relationship functions |
genoCN
|
Wei Sun |
genotyping and copy number study tools |
genomeIntervals
|
Julien Gagneur |
Operations on genomic intervals |
GenomicFeatures
|
Biocore Team c/o BioC user list
|
Tools for making and manipulating transcript centric annotations |
GenomicRanges
|
Biocore Team c/o BioC user list
|
Representation and manipulation of genomic intervals |
GGBase
|
Vince Carey |
infrastructure for genetics of gene expression (c) 2008 VJ Carey |
GGtools
|
Vince Carey |
software and data for genetics of gene expression (c) 2006 VJ
Carey |
GSRI
|
Julian Gehring |
Gene Set Regulation Index |
IRanges
|
Biocore Team c/o BioC user list
|
Infrastructure for manipulating intervals on sequences |
LiquidAssociation
|
Yen-Yi Ho |
LiquidAssociation |
logicFS
|
Holger Schwender |
Identification of SNP Interactions |
MassArray
|
Reid F. Thompson |
Analytical Tools for MassArray Data |
pint
|
Olli-Pekka Huovilainen |
Pairwise INTegration of functional genomics data |