Multiple platform build/check report for BioC 3.20 - BUILD results for snifter on palomino8

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.3 (2025-02-28) -- "Trophy Case"	4764
palomino8	Windows Server 2022 Datacenter	x64	4.4.3 (2025-02-28 ucrt) -- "Trophy Case"	4495
merida1	macOS 12.7.5 Monterey	x86_64	4.4.3 (2025-02-28) -- "Trophy Case"	4522
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.3 (2025-02-28) -- "Trophy Case"	4449
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.4.3 (2025-02-28) -- "Trophy Case"	4426
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for snifter on palomino8

To the developers/maintainers of the snifter package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/snifter.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: snifter

Version: 1.16.0

Command: chmod a+r snifter -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe --arch x64 CMD build --keep-empty-dirs --no-resave-data snifter

StartedAt: 2025-03-31 22:01:21 -0400 (Mon, 31 Mar 2025)

EndedAt: 2025-03-31 22:02:57 -0400 (Mon, 31 Mar 2025)

EllapsedTime: 96.5 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   chmod a+r snifter -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe --arch x64 CMD build --keep-empty-dirs --no-resave-data snifter
###
##############################################################################
##############################################################################


* checking for file 'snifter/DESCRIPTION' ... OK
* preparing 'snifter':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'snifter.Rmd' using rmarkdown

Quitting from snifter.Rmd:93-103 [split]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `py_call_impl()`:
! OSError: GetModuleFileNameEx failed
Run `reticulate::py_last_error()` for details.
---
Backtrace:
    ▆
 1. └─snifter::fitsne(train_mat, random_state = 42L)
 2.   └─snifter:::.create_tsne(...)
 3.     └─basilisk::basiliskRun(proc, .run_tsne, x = x, ...)
 4.       └─snifter (local) fun(...)
 5.         └─obj$fit(x)
 6.           └─reticulate:::py_call_impl(callable, call_args$unnamed, call_args$named)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'snifter.Rmd' failed with diagnostics:
OSError: GetModuleFileNameEx failed
Run `reticulate::py_last_error()` for details.
--- failed re-building 'snifter.Rmd'

SUMMARY: processing the following file failed:
  'snifter.Rmd'

Error: Vignette re-building failed.
Execution halted